Molecular Characterization of Non-typhoidal Salmonella (NTS) Isolated from Salad Vegetables in Terengganu, Malaysia
DOI:
https://doi.org/10.11113/mjfas.v19n1.2799Keywords:
Salad vegetables, non-typhoidal Salmonella, virulence genes, genetic relatedness, ERIC-PCR, BOX-PCRAbstract
Salad vegetables are the important sources of vitamins and minerals for human diet. However, salad vegetables are potential vehicles for non-typhoidal Salmonella spp. (NTS) as reported in our previous study. Such contamination posed significant food poisoning risk to consumer. The aims of present study include determination of the virulence genes prevalence in NTS isolates in samples from retail markets and farms. Besides, characterization of NTS isolates was performed to determine their genetic relatedness. Multiplex PCR assay was done to detect the presence of 15 virulence genes in 58 NTS isolates. The genetic relatedness of 33 NTS belonging to S. Weltevreden, S. Albany, S. Hvittingfoss, S. Aberdeen, S. Poona and S. Corvallis were characterized using ERIC-PCR and BOX-PCR typing methods. Results showed the presence of 13 virulence genes (spiA, pagC, msgA, invA, sipB, prgH, spaN, orgA, tolC, sitC, lpfC, sifA and sopB) among all the isolates with 53 (91.38%) isolates carried more than 11 virulence genes, while other five isolates carried the genes in the range of six to nine types. None of the isolates possessed spvB and pefA genes. Major clusters were observed at a genetic distance percentage of 90% for both ERIC- and BOX-PCR with discriminatory index of 0.917 and 0.873, respectively. In terms of source and type of sample, all NTS isolates were found diverse without clear association, thus no specific cluster was found. In summary, this study demonstrated the potential risks of NTS from salad vegetables to cause foodborne diseases and they were commonly found to be related with regard to their specific serovars.
References
Abakpa, G. O., Umoh, V. J., Ameh, J. B., Yakubu, S. E., Kwaga, J. K. P., & Kamaruzaman, S. (2015). Diversity and antimicrobial resistance of Salmonella enterica isolated from fresh produce and environmental samples. Environmental Nanotechnology, Monitoring & Management, 3, 38-46.
Abatcha, M. G., Effarizah, M. E., & Rusul, G. (2019). Antibiotic susceptibility and molecular characterization of Salmonella enterica serovar Paratyphi B isolated from vegetables and processing environment in Malaysia. International Journal of Food Microbiology, 290, 180-183.
Abatcha, M. G., Effarizah., M. E., & Rusul, G. (2018). Prevalence, antimicrobial resistance, resistance genes and class 1 integrons of Salmonella serovars in leafy vegetables, chicken carcasses and related processing environments in Malaysian fresh food markets. Food Control, 91, 170-180.
Ahmed, H. A., El-Hofy, F. I., Shafik, S. M., Abdelrahman, M. A., & Elsaid, G. A. (2016). Characterization of Virulence-associated genes, antimicrobial resistance genes, and class 1 integrons in salmonella enterica serovar typhimurium isolates from chicken meat and humans in Egypt. Foodborne Pathogens and Disease, 13(6), 281-288.
Almeida, F., Medeiros, M. I. C., Kich, J. D., & J. P. Falcão, J. P. (2016). Virulence-associated genes, antimicrobial resistance and molecular typing of Salmonella Typhimurium strains isolated from swine from 2000 to 2012 in Brazil. Journal of Applied Microbiology, 120, 1677-1690.
Bilung, L. M., Chai, L. S., Tahar, A. S., Ted, C. K., & Apun, K. (2018). Prevalence, genetic heterogeneity and antibiotic resistance profile of Listeria spp. and Listeria monocytogenes at farm level: A highlight of ERIC- and BOX-PCR to reveal genetic diversity. BioMed Research International, 3067494.
Brankatschk, K., Blom, J., Goesmann, A., Smits, T. H. M., & Duffy, B. (2012). Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars. International Journal of Food Microbiology, 155(3), 247-256.
Fang, Y., Huang, H., Li, B., Ruan, F., Li, Z., Huang, W., Wei, Q., & Huang, K. (2022). An outbreak of Salmonella Hvittingfoss infection in a tourist group back from Hong Kong, Southeast China. Journal of Infection, 84(4), e28-e30.
Fardsanei, F., Dallal, M. M. S., Douraghi, M., Memariani, H., Bakhshi, B., Salehi, T. Z., & Nikkhahi, F. (2018). Antimicrobial resistance, virulence genes and genetic relatedness of Salmonella enterica serotype Enteritidis isolates recovered from human gastroenteritis in Tehran, Iran. Journal of Global Antimicrobial Resistance, 12, 220-226.
Gao, R., Wang, L., & Ogunremi, D. (2019). Virulence determinants of non-typhoidal Salmonellae. In Microorganisms; Blumenberg, M., Shaaban, M., Elgaml, A., Eds. IntechOpen: London, UK, pp. 1671-92.
Geranmayeh, A., Hoseini, F., & Rafiei Tabatabaei, R. (2017). Comparison of genomic polymorphisms and genetic relation of clinical Salmonella enterica serovar Typhimurium isolates in Kerman Province by ERIC-PCR and BOX-PCR methods. Journal of Shahid Sadoughi University of Medical Sciences, 25(7), 564-571.
Gharieb, R., Fawzi, E., & Elsohaby, I. (2019). Antibiogram, virulotyping and genetic diversity of Escherichia coli and Salmonella serovars isolated from diarrheic calves and calf handlers. Comparative Immunology, Microbiology and Infectious Diseases, 67,101367.
Hashemi, A., & Baghbani-arani, F. (2015). The effective differentiation of Salmonella isolates using four PCR-based typing methods. Journal of Applied Microbiology, 118, 1530-1540.
Haslinda, W. H., Tang, J. Y. H., Tuan Zainazor, T. C., Mohd Khairi Hilman, A. L., Wan Norezah, W. M., Irdawaty, T., & Noor Hafizatulakmal, H. (2022). Prevalence and antimicrobial susceptibility of non-typhoidal Salmonella (NTS) from salad vegetables at farms and retail markets in Terengganu, Malaysia. Food Research, 6(1), 274-286.
Hassena, A. B., Haendiges, J., Zormati, S., Guermazi, S., Gdoura, R., Gonzalez-Escalona, N., & Siala, M. (2021). Virulence and resistance genes profiles and clonal relationships of non-typhoidal food-borne Salmonella strains isolated in Tunisia by whole genome sequencing. International Journal of Food Microbiology, 337, 108941.
Hunter, P. R., & Gaston, M. A. (1988). Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity. Journal of Clinical Microbiology, 26(11), 2465-2466.
ISO (International Organization for Standardization). (2002). ISO 6579:2002, Microbiology of food and animal feeding stuffs — Horizontal method for the detection of Salmonella spp., Geneva, Switzerland.
Kim, J. E., & Lee, Y. J. (2017). Molecular characterization of antimicrobial resistant non-typhoidal Salmonella from poultry industries in Korea. Irish Veterinary Journal, 70(20), 1-9.
Lee, J.-J., Wu, Y.-C., Kuo, C.-J., Hsuan, S.-L., & Chen, T.-H. (2016). TolC is important for bacterial survival and oxidative stress response in Salmonella enterica serovar Choleraesuis in an acidic environment. Veterinary Microbiology, 193, 42-48.
Lozano-Villegas, K., Rodríguez-Hernández, R., & Rondón-Barragán, I. (2019). Effectiveness of six molecular typing methods as epidemiological tools for the study of Salmonella isolates in two Colombian regions. Veterinary World, 12(12), 1998-2006.
Minh, D. K., Hounmanou, Y. M. G., Mai, H. B. T., Olsen, J. E., & Dalsgaard, A. (2020). Prevalence and genomic characterization of Salmonella Weltevreden in commercial pig feed. Veterinary Microbiology, 246,108725.
Nair, A., Rawool, D. B., Doijad, S., Poharkar, K., Mohan, V., Barbuddhe, S. B., Kolhe, R., Kurkure, N. V., Kumar, A., Malik, S. V. S., & Balasaravanan, T. (2015). Biofilm formation and genetic diversity of Salmonella isolates recovered from clinical, food, poultry and environmental sources. Infection, Genetics and Evolution, 36, 424-433.
Ngoi, S. T., Teh, C. S. J., Chai, L. C., & Thong, K. L. (2015). Overview of molecular typing tools for the characterization of Salmonella enterica in Malaysia. Biomedical and Environmental Sciences, 28(10), 751-764.
Poonchareon, K., Pulsrikarn, C., Nuanmuang, N., & Khamai, P. (2019). Effectiveness of BOX-PCR in differentiating genetic relatedness among Salmonella enterica serotype 4,[5],12:i:- isolates from hospitalized patients and minced pork samples in Northern Thailand. International Journal of Microbiology, 5086240.
Sabri, J. B., Al-Sultan, I. I., Altaif, K., Peter, S., & Saadh, M. J. (2020). Pathogenesis of Salmonella enterica serovar Albany in experimental infected SPF BALB/c Mice. Iraqi Journal of Veterinary Sciences, 34(2), 339-344.
Sever, N. K., & Akan, M. (2019). Molecular analysis of virulence genes of Salmonella Infantis isolated from chickens and turkeys. Microbial Pathogenesis, 126,199-204.
Sharma, J., Kumar, D., Hussain, S., Pathak, A., Shukla, M., Kumar V, P., Anisha, P. N., Rautela, R., Upadhyay, A. K., & Singh, S. P. (2019). Prevalence, antimicrobial resistance and virulence genes characterization of nontyphoidal Salmonella isolated from retail chicken meat shops in Northern India. Food Control, 102, 104-111.
Skyberg, J. A., Logue, C. M., & Nolan, L. K. (2006). Virulence genotyping of Salmonella spp. with multiplex PCR. Avian Diseases, 50, 77-81.
Tamang, M. D., Gurung, M., Nam, H.-M., Moon, D. C., Jang, G.-C., Suk-Chan Jung, S.-C., & Lim, S.-K. (2014). Antimicrobial susceptibility and virulence characteristics of Salmonella enterica Typhimurium isolates from healthy and diseased pigs in Korea. Journal of Food Protection, 77(9), 1481-1486.
Tang, J. Y. H., Ismail, A. A., & Badaluddin, N. A. (2018). Detection, isolation and antimicrobial testing of Listeria monocytogenes in chicken from supermarket. International Journal of Engineering & Technology, 7(4.43), 113-116.
Viana, C., Sereno, M. J., Pegoraro, K., Yamatogi, R. S., Call, D. R., Bersot, L.dS., & Nero, L. A. (2019). Distribution, diversity, virulence genotypes and antibiotic resistance for Salmonella isolated from a Brazilian pork production chain. International Journal of Food Microbiology, 310, 108310.
Wan, J., Zheng, L., Kong, L., Lu, Z., Tao, Y., Feng, Z., Lv, F., Meng, F., & Bie, X. (2021). Development of a rapid detection method for real-time fluorescent quantitative PCR of Salmonella spp. and Salmonella Enteritidis in ready-to-eat fruits and vegetables. LWT – Food Science and Technology, 149, 111837.
Webber, B., Borges, K. A., Furian, T. Q., Rizzo, N. N., Tondo, E. C., dos Santos, L. R., Rodrigues, L. B., & do Nascimento, V. P. (2019). Detection of virulence genes in Salmonella Heidelberg isolated from chicken carcasses. Revista do Instituto de Medicina Tropical de São Paulo, 61, e36.
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